Taxonomie des Procaryotes
Accueil
Introduction
Classification résumée
Classification générale
Liste alphabétique

Groupes trophiques spéciaux

Classification de Cavalier-Smith
Conclusion
Biblio
Plan du site
 
Synonymes
         
BIBLIOGRAPHIE ET LIENS WEB

 

OUVRAGES MAJEURS

Bergey's manual of determinative bacteriology, 8e édition (1974) R.E. Buchanan et N.E. Gibbons, eds., The Williams & Wilkins Company, Baltimore.

Bergey's manual of systematic bacteriology, Volume 1 (1984) N.R. Krieg et J.G.Holt, eds, Williams & Wilkins, Baltimore, London.

Bergey's manual of systematic bacteriology, Volume 2 (1986) N.R. Krieg et J.G.Holt, eds, Williams & Wilkins, Baltimore, London.

Bergey's manual of systematic bacteriology, Volume 3 (1989) J.T. Staley, M.P. Bryant, N. Pfennig et J.G. Holt, eds, Williams & Wilkins, Baltimore, London.

Bergey's manual of systematic bacteriology, Volume 4 (1989) S.T. Williams, M.E. Sharpe et J.G. Holt, eds, Williams & Wilkins, Baltimore, London.

The Prokaryotes, Volumes 1 et 2 (1981) M.P. Starr, H. Stolp, H.G. Trüper, A. Balows et H.G. Schlegel, eds, Springer-Verlag, Berlin, Heidelberg, New-york.

The Bacteria, a Treatise on structure and function, Volume VIII Archaebacteria (1985) J.R. Sokatch, L.N. Ornston, C.R. Woese et R.S. Wolfe, eds, Academic Press, Inc., Orlando, E.U.

Bergey's manual of systematic bacteriology, Second Edition, Volume 1 (2001) The Archaea and the deeply branching and phototrophic Bacteria. D.R. Boone, R.W. Castenholz & G.M. Garrity, eds, Springer-Verlag, New York, Berlin, Heidelberg.

Bergey's manual of systematic bacteriology, Second Edition, Volume 2 (2005) The Proteobacteria, Part A, Introductory Essays. G.M. Garrity, ed.-in-chief, Springer-Verlag, New York, Berlin, Heidelberg.

Bergey's manual of systematic bacteriology, Second Edition, Volume 2 (2005) The Proteobacteria, Part B, The Gammaproteobacteria. G.M. Garrity, D.J. Brenner, N.R. Krieg & J.R. Staley, Springer-Verlag, New York, Berlin, Heidelberg.

Bergey's manual of systematic bacteriology, Second Edition, Volume 2 (2005) The Proteobacteria, Part C, the Alpha-, Beta-, Delta- and Epsilonproteobacteria. D.J. Brenner, N.R. Krieg, J.T. Staley & G.M. Garrity, eds, Springer-Verlag, New York, Berlin, Heidelberg.

Bergey's manual of systematic bacteriology, Second Edition, Volume 3 (2009) The Firmicutes. P. De Vos, G.M. Garrity, D. Jones, N.R. Krieg, W. Ludwig, F.A. Rainey, K.-H. Schleifer & W.B. Whitman, Baltimore: The Williams & Wilkins Co.

Bergey's manual of systematic bacteriology, Second Edition, Volume 4 (2010) The Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), Acidobacteria, Fibrobacteres, Fusobacteria, Dictyoglomi, Gemmatimonadetes, Lentisphaerae, Verrucomicrobia, Chlamydiae, and Planctomycetes. N.R. Krieg, J.T. Staley, D.R. Brown, B. Hedlund, B.J. Paster, N. Ward, W. Ludwig & W.B. Whitman, eds, Baltimore: The Williams & Wilkins Co.

Bergey's manual of systematic bacteriology, Second Edition, Volume 5 (2011) The Actinobacteria. M. Goodfellow, P. Kämpfer, H.-J. Busse, M. Trujillo, K.-I. Suzuki, W. Ludwig & W.B. Whitman, eds,Baltimore: The Williams & Wilkins Co.

Introduction à la microbiologie (2003) G.J. Tortora, B.R. Funke, C.L. Case & L. Martin, eds, ERPI, Saint-Laurent, Québec.

SITES WEB

http://vm.cfsan.fda.gov/~mow/intro.html

Information sur les bactéries pathogènes des aliments (U.S. Food & Drug Administration, Center for Food Safety & Applied Nutrition)

http://www.kcom.edu/faculty/chamberlain/Website/gallery.htm

Photographies de bactéries pathogènes

http://www.bacterio.cict.fr

Liste officielle des genres et espèces de procaryotes avec leurs références bibliographiques.

http://en.wikipedia.org/wiki/Prokaryote

Procaryotes sur Wikipedia

http://www.earthlife.net/prokaryotes/welcome.html

Généralités sur les Procaryotes

http://textbookofbacteriology.net/structure.html
http://textbookofbacteriology.net/procaryotes.html

Cours en ligne sur les Procaryotes

http://www.the-icsp.org/

Site de l’International Committee on Systematics of Prokaryotes (ICSP)

http://www.springer.com/west/home/life+sci?SGWID=4-10027-22-45855495-0

La référence bibliographique
  

*** Uniprot taxonomy browser
http://www.ebi.ac.uk/newt/display?search=2

 

BIBLIOGRAPHIE DE JEAN-LOUIS GARCIA

Articles dans une revue

1. Vancura V, Garcia J-L (1969) Root exsudates of reversibly wilted millet plants (Panicum miliaceum). Œcol. Plant. 4, 93-98. .pdf

2. Garcia J-L, Raimbault M, Mouraret M (1971) Dispositif stérile pour cultures hydroponiques. Biologie du Sol 14, 34-37. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/06835.pdf

3. Garcia J-L (1973) Influence de la rhizosphère du riz sur l’activité dénitrifiante potentielle des sols de rizière du Sénégal. Œcol. Plant. 8, 315-323. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/06729.pdf

4. Garcia J-L (1973) Séquence des produits formés au cours de la dénitrification dans les sols de rizières du Sénégal. Ann. Microbiol. (Inst. Pasteur) 124 B, 351-362. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/06728.pdf

5. Garcia J-L, Raimbault M, Jacq V, Rinaudo G, Roger P (1974) Activités microbiennes dans les sols de rizières du Sénégal : relations avec les propriétés physico-chimiques et influence de la rhizosphère. Rev. Ecol. Biol. Sol 11, 169-185. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/07259.pdf

6. Garcia J-L (1974) Réduction de l’oxyde nitreux dans les sols de rizières du Sénégal : mesure de l’activité dénitrifiante. Soil Biol. Biochem. 6, 79-84. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/07258.pdf

7. Garcia J-L (1975) La dénitrification dans les sols. Bull. Inst. Pasteur 73, 167-193. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/07671.pdf

8. Garcia J-L (1975) Evaluation de la dénitrification dans les rizières par la méthode de réduction du N2O. Soil Biol. Biochem. 7, 251-256. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/07900.pdf

9. Garcia J-L (1975) Effet rhizosphère du riz sur la dénitrification. Soil Biol. Biochem. 7, 139-141. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/07674.pdf

10. Baldensperger J, Garcia J-L (1975) Reduction of oxidized inorganic nitrogen compounds by a new strain of Thiobacillus denitrificans. Arch. Microbiol. 103, 31-36. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/08677.pdf

11. Pichinoty F, Mandel M, Greenway B, Garcia J-L (1975) Isolement à partir du sol et étude d’une bactérie dénitrifiante appartenant au genre Alcaligenes. C. R. Acad. Sci. (Paris) sér. D 281, 1273-1275. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/08643.pdf

12. Garcia J-L (1976) Production d’oxyde nitrique dans les sols de rizière. Ann. Microbiol. (Inst. Pasteur) 127 A, 401-414. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_08-09/08875.pdf

13. Pichinoty F, Bigliardi-Rouvier J, Mandel M, Greenway B, Garcia J-L (1976) The isolation and properties of a denitrifying bacterium of the genus Flavobacterium. Anton. Leeuwhenhoek 42, 349-354. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/08665.pdf

14. Pichinoty F, De Barjac H, Mandel M, Greenway B, Garcia J-L (1976) Une nouvelle bactérie sporulée, dénitrifiante, mésophile : Bacillus azotoformans n. sp. Ann. Microbiol. (Institut Pasteur) 127 B, 351-361. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/08646.pdf

15. Pichinoty F, Mandel M, Garcia J-L (1977) Etude de six souches de Agrobacterium tumefaciens et Agrobacterium radiobacter. Ann. Microbiol. (Inst. Pasteur) 128 A, 303-310. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/08645.pdf

16. Pichinoty F, Mandel M, Garcia J-L (1977) Etude de six souches de Paracoccus denitrificans. Ann. Microbiol. (Inst. Pasteur) 128 B, 243-251. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_08-09/09152.pdf

17. Garcia J-L (1977) Evaluation de la dénitrification dans les rizières par la mesure de l’activité oxyde nitreux réductase. Etude complémentaire. Cah. ORSTOM, sér. Biol. 12, 89-95. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_4/biologie/17770.pdf

18. Garcia J-L (1977) La dénitrification en sol de rizière : influence de la nature et du mode d’épandage des engrais azotés. Cah. ORSTOM., sér. Biol. 12, 83-87. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_4/biologie/17769.pdf

19. Raimbault M, Rinaudo G, Garcia J-L, Boureau M (1977) A device to study metabolic gases in the rice rhizosphère. Soil Biol. Biochem. 9, 193-196. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/08638.pdf

20. Garcia J-L (1977) Etude de la dénitrification chez une bactérie thermophile sporulée. Ann. Microbiol. (Inst. Pasteur) 128 A, 447-458. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/08842.pdf

21. Garcia J-L (1977) Analyse de différents groupes composant la microflore dénitrifiante des sols de rizières du Sénégal. Ann. Microbiol. (Inst. Pasteur) 128 A, 433-446. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/08841.pdf

22. Pichinoty F, Mandel M, Greenway B, Garcia J-L (1977) Etude de 14 bactéries dénitrifiantes appartenant au groupe Pseudomonas stutzeri isolées du sol par culture d’enrichissement en présence d’oxyde nitreux. Ann. Microbiol. (Inst. Pasteur) 128 A, 75-87. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/08644.pdf

23. Pichinoty F, Mandel M, Greenway B, Garcia J-L (1977) The isolation and properties of a denitrifying bacterium related to Pseudomonas lemoignei. Int. J. Syst. Bact. 27, 346-348. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_08-09/09158.pdf

24. Garcia J-L, Pichinoty F, Mandel M, Greenway B (1977) A new denitrifying saprophyte related to Pseudomonas pickettii. Ann. Microbiol. (Inst. Pasteur) 128 A, 229-237. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_04-05/03885.pdf

25. Pichinoty F, Garcia J-L, Job C, Durand M (1978) La dénitrification chez Bacillus licheniformis. Can. J. Microbiol. 24, 45-49. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_08-09/09432.pdf

26. Pichinoty F, Garcia J-L, Mandel M, Job C, Durand M (1978) Isolement de bactéries utilisant en anaérobiose l’oxyde nitrique comme accepteur d’électrons respiratoires. C. R. Acad . Sci. (Paris) Sér. D 286, 1403-1405. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_08-09/09302.pdf

27. Pichinoty F, Durand M, Job C, Mandel M, Garcia J-L (1978) Etude morphologique, physiologique et taxonomique de Bacillus azotoformans . Can. J. Microbiol. 24, 608-617. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_08-09/09574.pdf

28. Pichinoty F, Veron M, Mandel M, Durand M, Job C, Garcia J-L (1978) Etude physiologique et taxonomique du genre Alcaligenes : A. denitrificans, A. odorans et A. faecalis. Can. J. Microbiol. 24, 743-753. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_08-09/09573.pdf

29. Garcia J-L (1979) Etude de la dénitrification dans les sols de rizières du Sénégal. Cah. ORSTOM, Sér. Biol. 13, 117-127. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_4/biologie/19933.pdf

30. Pichinoty F, Mandel M, Garcia J-L (1979) Properties of novel mesophilic denitrifying Bacillus cultures found in tropical soils. J. Gen. Microbiol. 115, 419-430. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_02-03/01737.pdf

31. Roussos S, Garcia J-L, Rinaudo G, Gauthier D (1980) Distribution de la microflore hétérotrophe aérobie et en particulier des bactéries dénitrifiantes et fixatrices d’azote libres dans la rhizosphère du riz. Ann. Microbiol. (Inst. Pasteur) 131 A, 197-207. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_08-09/10134.pdf

32. Pichinoty F, Garcia J-L, Mandel M (1980) Taxonomie numérique de 46 souches dénitrifiantes et mésophiles de Bacillus isolées à partir du sol par culture sélective en présence de nitrite. Can. J. Microbiol. 26, 787-795. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_02-03/01736.pdf

33. Garcia J-L (1981) La biosynthèse des enzymes de la dénitrification chez 5 bactéries dénitrifiantes. Cah. ORSTOM, Sér. Biol. 43, 3-6. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_4/biologie/00480.pdf

34. Garcia J-L, Roussos S, Bensoussan M (1981) Etude taxonomique de bactéries dénitrifiantes isolées sur benzoate dans des sols de rizières du Sénégal. Cah. ORSTOM, Sér. Biol. 43, 13-25. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_4/biologie/00482.pdf

35. Garcia J-L, Feller C (1981) Influence de la teneur en éléments fins et de la nature des minéraux argileux sur la dénitrification dans divers sols tropicaux. Cah. ORSTOM, Sér. Biol. 43, 7-12. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_4/biologie/00481.pdf

36. Garcia J-L, Roussos S, Bensoussan M, Bianchi A, Mandel M (1982) Taxonomie numérique de Bacillus thermophiles isolés de sols de rizières de l’Afrique de l’ouest. Ann. Microbiol. (Inst. Pasteur) 133 A, 471-488. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_02-03/02199.pdf

37. Garcia J-L, Guyot J-P, Ollivier B, Trad M, Paycheng C (1982) Ecologie microbienne de la digestion anaérobie. Techniques de numération et d’isolement. Cah. ORSTOM, Sér. Biol. 45, 1-16. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_4/biologie/03179.pdf

38. Feller C, Bernhardt-Reversat F, Garcia J-L, Pantier J-J, Roussos S, Van Vliet-Lanoe B (1983) Etude de la matière organique de différentes fractions granulométriques d’un sol sableux tropical. Effet d’un amendement organique (compost). Cah. ORSTOM, Sér. Pédol. 20, 223-238.

39. Roussos S, Garcia J-L, Raimbault M (1983) Valorisation de la cossette de betterave par culture de Trichoderma harzianum en milieu liquide et solide. Ind. Alim. Agr. 100, 449-452. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_12-13/15787.pdf

40. Garcia J-L, Roussos S, Gauthier D, Rinaudo G, Mandel M (1983) Etude taxonomique de bactéries azotofixatrices libres isolées de l’endorhizosphère du riz. Ann. Microbiol. (Inst. Pasteur) 134 B, 329-346. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_12-13/15785.pdf

41. Labat M, Garcia J-L, Meyer F, Deschamps F (1984) Anaerobic digestion of sugar beet pulps. Biotechnol. Lett. 6 , 379-384. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_14-15/17313.pdf

42. Ollivier B, Lombardo A, Garcia J-L (1984) Isolation and characterization of a new thermophilic Methanosarcina strain (strain MP). Ann. Microbiol. (Inst. Pasteur) 135 B, 187-198. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_14-15/17317.pdf

43. Guyot J-P, Traore I, Garcia J-L (1985) Methane production from propionate by methanogenic mixed culture. FEMS Microbiol. Lett. 26, 329-332. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/doc34-03/34416.pdf

44. Ollivier B, Mah RA, Garcia J-L, Robinson R (1985) Isolation and characterization of Methanogenium aggregans sp.nov. Int.J. Syst. Bacteriol. 35, 127-130. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_45-46/010006074.pdf

45. Ollivier B, Cord-Ruwisch R, Lombardo A, Garcia J-L (1985) Isolation and characterization of Sporomusa acidovorans sp.nov., a methylotrophic homoacetogenic bacterium. Arch. Microbiol. 142, 307-310. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_18-19/24475.pdf

46. Ollivier B, Smiti N, Garcia J-L (1985) Thermophilic methanogenesis from sugar beet pulp by a defined mixed bacterial culture. Biotechnol. Lett. 7, 847-852. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_18-19/24193.pdf

47. Cord-Ruwisch R, Garcia J-L (1985) Isolation and characterization of an anaerobic benzoate-degrading, spore-forming sulfate-reducing bacterium, Desulfotomaculum sapomendens sp.nov. FEMS Microbiol. Lett. 29, 325-330. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_18-19/24198.pdf

48. Ollivier B, Mah RA, Ferguson TJ, Boone DR, Garcia J-L, Robinson R (1985) Emendation of the genus Thermobacteroides; Thermobacteroides proteolyticus sp.nov., a proteolytic acetogen from a methanogenic enrichment. Int. J. Syst. Bacteriol. 35, 425-428. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_31-32/34000.pdf

49. Ollivier B, Smiti N, Mah RA, Garcia J-L (1986) Thermophilic methanogenesis from gelatin by a mixed defined bacterial culture. Appl. Microbiol. Biotechnol. 24, 79-83.

50. Smiti N, Ollivier B, Garcia J-L (1986) Thermophilic degradation of cellulose by a triculture of Clostridium thermocellum, Methanobacterium sp. and Methanosarcina MP. FEMS Microbiol. Lett. 35, 93-97. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_18-19/24192.pdf

51. Ollivier B, Mah RA, Garcia J-L, Boone D (1986) Isolation and characterization of Methanogenium bourgense sp.nov. Int. J. Syst. Bacteriol. 36, 297-301. http://ijs.sgmjournals.org/cgi/reprint/36/2/297

52. Cord-Ruwisch R, Ollivier B, Garcia J-L (1986) Fructose degradation by Desulfovibrio sp. In pure culture and in coculture with Methanospirillum hungatei . Curr. Microbiol. 13, 285-289. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_18-19/24199.pdf

53. Labat M, Garcia J-L (1986) Study on the development of methanogenic microflora during anaerobic digestion of sugar beet pulp. Appl. Microbiol. Biotechnol. 25, 163-168. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_18-19/23788.pdf

54. Brauman A, Labat M, Garcia J-L (1987) Contribution à l'étude de la microflore hétérotrophe de termites supérieurs à régimes alimentaires différenciés. Bull. INRA 21, 68-78. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_18-19/25480.pdf

55. Dreyfus B, Garcia J-L, Gillis M (1988) Characterization of Azorhizobium caulinaudans gen. nov., sp. nov., a stem-nodulating nitrogen-fixing bacterium isolated from sesbania rostrata. Int. J. Syst. Bacteriol. 38, 89-98. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_39-40/43334.pdf

56. Esnault G, Caumette P, Garcia J-L (1988) Characterization of Desulfovibrio giganteus sp.nov., a sulfate-reducing bacterium isolated from a brackish coastal lagoon. Syst. Appl. Microbiol.10, 147-15. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_20-21/27198.pdf

57. Ollivier B, Cord-Ruwisch R, Hatchikian C, Garcia J-L (1988) Characterization of Desulfovibrio fructosovorans sp.nov. Arch. Microbiol. 149, 447-450. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_20-21/26564.pdf

58. Daumas S, Garcia J-L (1988) Desulfotomaculum geothermicum sp.nov., a new thermophilic, fatty acids-degrading, sulfate-reducing bacterium isolated with H2 from geothermal groundwater. Anton. Leeuwenhoek J. Microbiol. 54,165-178. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_20-21/26565.pdf

59. Sow D, Ollivier B, Viaud P, Garcia J-L (1989) Mesophilic and thermophilic methane fermentation of Euphorbia tirucalli . MIRCEN J. Appl. Microbiol. Biotechnol. 5, 547-550. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_23-25/30849.pdf

60. Ollivier B, Garcia J-L (1990) Thermophilic methanogenesis from pectin by a mixed defined bacterial culture. Curr. Microbiol. 66, 77-81. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_23-25/30836.pdf

61. Garcia J-L (1990) Taxonomy and ecology of methanogens. FEMS Microbiol. Rev. 87, 297-308. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_31-32/34552.pdf

62. Brauman A, Koenig J-F, Dutreix J, Garcia J-L (1990) Characterization of two sulfate-reducing bacteria from the gut of the soil-feeding termite, Cubitermes sp. Anton. Leeuwenhoek 58, 271-275. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_31-32/34551.pdf

63. Qatibi AI, Bories A, Garcia J-L (1990) Effects of sulfate on lactate and C2-, C3-volatile fatty acid anaerobic degradation by a mixed microbial culture. Anton. Leeuwenhoek 58, 241-248. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_31-32/34550.pdf

64. Qatibi AI, Bories A, Garcia J-L (1991) Sulfate reduction and anaerobic glycerol degradation by a mixed microbial culture. Curr. Microbiol. 22, 47-52. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_31-32/34549.pdf

65. Ollivier B, Hatchikian CE, Prensier G, Guezenec J, Garcia J-L (1991) Desulfohalobium retbaense gen.nov., sp.nov., a halophilic sulfate-reducing bacterium from sediments of a hypersaline lake in Senegal. Int. J. Syst. Bacteriol. 41, 74-81. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_31-32/34555.pdf

66. Qatibi AI, Niviere V, Garcia J-L (1991) Desulfovibrio alcoholovorans sp. nov., a sulfate-reducing bacterium able to grow on glycerol, 1,2- and 1,3-propanediol. Arch. Microbiol. 155, 143-148. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_31-32/34553.pdf

67. Hamdi M, Khadir A, Garcia J-L (1991) The use of Aspergillus niger for the bioconversion of olive mill waste-waters. Appl. Microbiol. Biotechnol. 34, 828-831. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_31-32/34643.pdf

68. Lawson Anani Soh A, Ralambotiana H, Ollivier B, Prensier G, Tine E, Garcia J-L (1991) Clostridium thermopalmarium sp.nov., a moderately thermophilic butyrate-producing bacterium isolated from palm wine in Senegal. Syst. Appl. Microbiol. 14,135-139. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_31-32/34554.pdf

69. Qatibi AI, Cayol J-L, Garcia J-L (1991) Glycerol and diol degradation by Desulfovibrio alcoholovorans in pure culture, in the presence of sulfate, or in syntrophic association with Methanospirillum . FEMS Microbiol. Ecol. 85, 233-240. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_33-34/36490.pdf

70. Hamdi M, Garcia J-L (1991) Comparaison between anaerobic filter and anaerobic contact process for fermented olive mill wastewaters. Biores. Technol. 38, 23-29. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_33-34/36491.pdf

71. Garcia J-L (1991) Les bactéries de l'extrême : une nouvelle voie de recherche sur les formes de vie les plus primitives. ORSTOM Actualités, 33, 25-29. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_7/carton07/010018653.pdf

72. Hethener P, Brauman A, Garcia J-L (1992) Clostridium termitidis sp. nov., a cellulolytic species from the gut of the wood-feeding termite, Nasutitermes lujae . Syst. Appl. Microbiol.15, 52-58. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_33-34/36503.pdf

73. Ouattara AS, Traore AS, Garcia J-L (1992) Characterization of Anaerovibrio burkinabensis sp. Nov., a lactate fermenting bacterium isolated from rice field soils. Int. J. Syst. Bacteriol. 42, 390-397. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_35-36/41229.pdf

74. Hamdi M, Brauman A, Garcia J-L (1992) Effect of an anaerobic bacterial consortium isolated from termites on the degradation of olive-mill wastewater. Appl. Microbiol. Biotechnol. 37, 408-410. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_35-36/41783.pdf

75. Ouattara A, Cuzin N, Traore AS, Garcia J-L (1992) Anaerobic degradation of 1,2-propanediol by a new Desulfovibrio strain and Desulfovibrio alcoholovorans. Arch. Microbiol. 158, 218-225. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_35-36/41230.pdf

76. Hamdi M, Garcia J-L, Ellouz R (1992) Integrated biological process for olive mill wastewaters treatment. Bioprocess Engineering 8,79-84. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_35-36/41232.pdf

77. Fardeau M-L, Ollivier B, Soubrane A, Sauve P, Prensier G, Garcia J-L, Belaich J-P (1993) Determination of the G+C content of two Syntrophus buswellii strains. Curr. Microbiol. 26, 185-189. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_35-36/41110.pdf

78. Hamdi M, Garcia J-L (1993) Anaerobic digestion of olive mill wastewaters after detoxification by prior culture of Aspergillus niger. Process Biochem. 28, 155-159. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_35-36/41231.pdf

79. Battaglia F, Morin D, Garcia J-L, Ollivier P (1994) Isolation and study of two strains of Leptospirillum-like bacteria from a natural mixed population cultured on a cobaltiferous pyrite substrate. Antonie van Leeuwenhoek 66, 295-302. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_35-36/41832.pdf

80. Ollivier B, Caumette P, Garcia J-L, Mah RA (1994) Anaerobic bacteria from hypersaline environments. Microbiol. Rev. 58, 27-38. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_35-36/41111.pdf

81. Cayol J-L, Ollivier B, Patel BKC, Prensier G, Guezennec J, Garcia J-L (1994) Isolation and Characterization of Halothermothrix orenii gen. nov., sp. nov., a halophilic, thermophilic, fermentative, strictly anaerobic bacterium. Int. J. Syst. Bacteriol. 44, 534 - 540. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_35-36/41101.pdf

82. Cayol J-L, Ollivier B, Lawson Anani Soh A, Fardeau M-L, Ageron E, Grimont PAD, Prensier G, Guezennec J, Magot M, Garcia J-L (1994) Haloincola saccharolytica subsp. senegalensis subsp. nov., isolated from the sediments of a hypersaline lake, and emended description of Haloincola saccharolytica. Int. J. Syst. Bacteriol. 44, 805-811. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_35-36/41103.pdf

83. Patel BKC, Andrews KT, Ollivier B, Mah RA, Garcia J-L (1995) Reevaluating the classification of Halobacteroides and Haloanaerobacter species based on sequence comparisons of the 16S ribosomal RNA gene. FEMS Microbiol. Lett. 134, 115-119. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_45-46/010006015.pdf

84. Cayol J-L, Ollivier B, Patel BKC, Ravot G, Magot M, Ageron E, Grimont PAD, Garcia J-L (1995) Description of Thermoanaerobacter brockii subsp. lactiethylicus subsp. nov. isolated from a deep subsurface french oil well : a proposal to reclassify Thermoanaerobacter finnii as Thermoanaerobacter brockii subsp. finnii comb. nov. and an emended description of Thermoanaerobacter brockii. Int. J. Syst.Bacteriol. 45, 783-789. http://ijs.sgmjournals.org/cgi/content/abstract/45/4/783

85. Cayol J-L, Ollivier B, Patel BKC, Ageron E, Grimont PAD, Prensier G, Garcia J-L (1995) Haloanaerobium lacusroseus sp. nov., an extremely halophilic fermentative bacterium from the sediments of a hypersaline lake. Int. J. Syst. Bacteriol. 45, 790-797. http://ijs.sgmjournals.org/cgi/content/abstract/45/4/790

86. Combet-Blanc Y, Ollivier B, Streicher C, Patel BKC, Dwivedi P, Pot B, Prensier G, Garcia J-L (1995) Bacillus thermoamylovorans sp. nov., a moderatly thermophilic and amylolytic bacterium. Int. J. Syst. Bacteriol. 45 , 9-16. http://ijs.sgmjournals.org/cgi/content/abstract/45/1/9

87. Fardeau M-L, Ollivier B, Patel BKC, Dwivedi P, Magot M, Garcia J-L (1995) Isolation and characterization of a thermophilic sulfate-reducing bacterium, Desulfotomaculum thermosapovorans sp. nov.. Int. J. Syst. Bacteriol. 45, 218-221. http://ijs.sgmjournals.org/cgi/content/abstract/45/2/218

88. Tsai CR, Garcia J-L, Patel BKC, Cayol J-L, Baresi L, Mah RA (1995) Haloanaerobium alcaliphilum sp. nov., an anaerobic moderate halophile from the sediments of Great Salt Lake, Utah. Int. J. Syst. Bacteriol. 45, 301-307. http://ijs.sgmjournals.org/cgi/content/abstract/45/2/301

89. Ravot G, Magot M, Fardeau M-L, Patel BKC, Prensier G, Egan A, Garcia J-L, Ollivier B (1995) Thermotoga elfii sp. nov., a novel thermophilic bacterium from an african oil-producing well. Int. J. Syst. Bacteriol., 45 (2), p. 308-314. http://ijs.sgmjournals.org/cgi/content/abstract/45/2/308

90. Ravot G, Ollivier B, Magot M, Patel BKC, Crolet JL, Fardeau M-L, Garcia J-L (1995) Thiosulfate reduction, an important physiological feature shared by members of the order Thermotogales. Appl. Environ. Microbiol. 61, 2053-2055. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_35-36/41833.pdf

91. Ravot G, Ollivier B, Fardeau M-L, Patel BKC, Andrews KT, Magot M, Garcia J-L (1996) L-Analine production from glucose fermentation by hyperthermophilic members of the domains Bacteria and Archaea : a remnant of an ancestral metabolism? Appl. Environ. Microbiol. 62, 2657-2659. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_45-46/010006520.pdf

92. Grech-Mora I, Fardeau M-L, Patel, BKC, Ollivier B, Rimbault A, Prensier G, Garcia J-L, Garnier-Sillam E (1996) Isolation and characterization of Sporobacter termitidis gen. nov., sp. nov. from the digestive tract of the wood-feeding termite Nasutitermes lujae. Int. J. Syst. Bacteriol. 46, 512-518. http://ijs.sgmjournals.org/cgi/content/abstract/46/2/512

93. Ravot G, Ollivier B, Patel BKC, Magot M, Garcia J-L (1996) Emended description of Thermosipho africanus as a carbohydrate- fermenting species using thiosulfate as an electron acceptor. Int. J. Syst. Bacteriol. 46, 321-323. http://ijs.sgmjournals.org/cgi/content/abstract/46/1/321

94. Magot M, Ravot G, Campaignolle X, Ollivier B, Patel BKC, Fardeau M-L, Thomas P, Crolet J-L, Garcia J-L (1997) Dethiosulfovibrio peptidovorans gen. nov., sp. nov., a new anaerobic, slightly halophilic, thiosulfate-reducing bacterium from corroding offshore oil wells. Int. J. Syst. Bacteriol. 47, 818-824. http://ijs.sgmjournals.org/cgi/content/abstract/47/3/818

95. Fardeau M-L, Ollivier B, Patel BKC, Magot M, Thomas P, Rimbault A, Rocchiccioli F, Garcia J-L (1997) Thermotoga hypogea sp. nov., a xylanolytic, thermophilic bacterium from an oil-producing well. Int. J. Syst. Bacteriol. 47, 1013-1019. http://ijs.sgmjournals.org/cgi/content/abstract/47/4/1013

96. Ravot G, Magot M, Ollivier B, Patel BKC, Ageron E, Grimont PAD, Thomas P, Garcia J-L (1997) Haloanaerobium congolense sp. nov., an anaerobic, moderately halophilic, thiosulfate- and sulfur-reducing bacterium from an African oil field. FEMS Microbiol. Lett. 147, 81-88. http://onlinelibrary.wiley.com/doi/10.1111/j.1574-6968.1997.tb10224.x/pdf

97. Ollivier B, Cayol J-L, Patel BKC, Magot M, Fardeau M-L, Garcia J-L (1997) Methanoplanus petrolearius sp. nov., a novel methanogenic bacterium from an oil-producing well. FEMS Microbiol. Lett. 147, 51-56. http://onlinelibrary.wiley.com/doi/10.1111/j.1574-6968.1997.tb10219.x/pdf

98. Mechichi T, Labat M, Woo THS, Thomas P, Garcia J-L, Patel BKC (1998) Eubacterium aggregans sp. nov., a new homoacetogenic bacterium from olive mill wastewater treatment digestor. Anaerobe 4, 283-291.

99. Baena S, Fardeau M-L, Labat M, Ollivier B, Thomas P, Garcia J-L, Patel BKC (1998) Aminobacterium colombiense gen. nov. sp. nov., an amino acid-degrading anaerobe isolated from anaerobic sludge. Anaerobe 4, 241-250.

100. Baena S, Fardeau M-L, Labat M, Ollivier B, Garcia J-L, Patel BKC (1998) Desulfovibrio aminophilus sp. nov., a novel amino acid degrading and sulfate reducing bacterium from an anaerobic dairy wastewater lagoon. Syst. Appl. Microbiol. 21, 498-504.

101. Tsu IH, Huang CY, Garcia J-L, Patel BKC, Cayol J-L, Baresi L, Mah RA (1998) Isolation and characterization of Desulfovibrio senezii sp. nov., a halotolerant sulfate reducer from a solar saltern and phylogenetic confirmation of Desulfovibrio fructosovorans as a new species. Arch. Microbiol. 170, 313-317. http://www.springerlink.com/content/?k=vol%3a(170)+p%3a(313)

102. Garcia J-L (1998) Les bactéries méthanogènes. Comptes-Rendus de l'Académie d'Agriculture de France 84, 23-33.

103. Battaglia-Brunet F, Hugues P d', Cabral T, Cezac C, Garcia J-L, Morin D ( 1998) The mutual effect of mixed Thiobacilli and Leptospirilli populations on pyrite bioleaching. Minerals Engineering 11, 195-205.

104. Ollivier B, Fardeau M-L, Cayol J-L, Magot M, Patel BKC, Prensier G, Garcia J-L (1998) Methanocalculus halotolerans gen. nov., sp. nov., isolated from an oil-producing well. Int. J. Syst. Bacteriol. 48, 821-828. http://ijs.sgmjournals.org/cgi/content/abstract/48/3/821

105. Qatibi AI, Bennisse R, Jana M, Garcia J-L (1998) Anaerobic degradation of glycerol by Desulfovibrio fructosovorans and D. carbinolicus and evidence for glycerol-dependent utilization of 1,2-propanediol. Curr. Microbiol. 36, 283-290. http://www.springerlink.com/content/ghhb9xebahtlrua3/

106. Brauman A, Müller JA, Garcia J-L, Brune A, Schink B (1998) Fermentative degradation of 3-hydroxybenzoate in pure culture by a novel strictly anaerobic bacterium, Sporotomaculum hydroxybenzoicum gen. nov., sp. nov.. Int. J. Syst. Bacteriol. 48, 215-221. http://ijs.sgmjournals.org/cgi/content/abstract/48/1/215

107. Mechichi T, Labat M, Garcia J-L, Thomas P, Patel BKC (1999) Sporobacterium olearium gen. nov., sp. nov., a new methanethiol-producing bacterium that degrades aromatic compounds, isolated from an olive millwastewater treatment digester. Int. J. Syst. Bacteriol. 49, 1741-1748. http://ijs.sgmjournals.org/cgi/content/abstract/49/4/1741

108. Mechichi T, Labat M, Garcia J-L, Thomas P, Patel BKC (1999) Characterization of a new xylanolytic bacterium, Clostridium xylanovorans sp. nov.. Syst. Appl. Microbiol. 22, 366-371.

109. Mechichi T, Labat M, Patel BKC, Woo THS, Thomas P, Garcia J-L (1999) Clostridium methoxybenzovorans sp. nov., a new aromatic o-demethylating homoacetogen from an olive mill wastewater treatment digester. Int. J. Syst. Bacteriol., 49, 1201-1209. http://ijs.sgmjournals.org/cgi/content/abstract/49/3/1201

110. Ravot G, Magot M, Fardeau M-L, Patel BKC, Thomas P, Garcia J-L, Ollivier B (1999) Fusibacter paucivorans gen. nov., sp. nov., an anaerobic, thiosulfate-reducing bacterium from an oil-producing well. Int. J. Syst. Bacteriol. 49, 1141-1147. http://ijs.sgmjournals.org/cgi/content/abstract/49/3/1141

111. Baena S, Fardeau M-L, Ollivier B, Labat M, Thomas P, Garcia J-L, Patel BKC (1999) Aminomonas paucivorans gen. nov., sp. nov., a mesophilic, anaerobic, amino-acid-utilizing bacterium. Int. J. Syst. Bacteriol. 49, 975-982. http://ijs.sgmjournals.org/cgi/content/abstract/49/3/975

112. Ouattara AS, Patel BKC, Cayol J-L, Cuzin N, Traore AS, Garcia J-L (1999) Isolation and characterization of Desulfovibrio burkinensis sp. nov. from an !african ricefield, and phylogeny of Desulfovibrio alcoholivorans. Int. J. Syst. Bacteriol. 49, 639-643. http://ijs.sgmjournals.org/cgi/content/abstract/49/2/639

113. Hernandez-Eugenio G, Fardeau M-L, Patel BKC, Macarie H, Garcia J-L, Ollivier B (2000) Desulfovibrio mexicanus sp. nov., a sulfate-reducing bacterium isolated from an upflow anaerobic sludge blanket (UASB) reactor treating cheese wastewaters. Anaerobe 6, 305-312.

114. Joulian C, Patel BKC, Ollivier B, Garcia J-L, Roger P-A (2000) Methanobacterium oryzae sp. nov., a novel methanogenic rod isolated from a Philippines ricefield. Int. J. Syst. Evol. Microbiol. 50, 525-528. http://ijs.sgmjournals.org/cgi/content/abstract/50/2/525

115. Huang CY, Garcia J-L, Patel BKC, Cayol J-L, Baresi L, Mah RA (2000) Salinivibrio costicola subsp. vallismortis subsp. nov., a halotolerant facultative anaerobe from Death Valley, and emended description of Salinivibrio costicola. Int. J. Syst. Evol. Microbiol. 50, 615-622. http://ijs.sgmjournals.org/cgi/content/abstract/50/2/615

116. Cayol J-L, Ducerf S, Patel BKC, Garcia J-L, Thomas P, Ollivier B (2000) Thermohalobacter berrensis gen. nov., sp. nov., a thermophilic, strictly halophilic bacterium from a solar saltern. Int. J. Syst. Evol. Microbiol. 50, 559-564. http://ijs.sgmjournals.org/cgi/content/abstract/50/2/559

117. Mechichi T, Fardeau M-L, Labat M, Garcia J-L, Verhé F, Patel BKC (2000) Clostridium peptidivorans sp. nov., a peptide-fermenting bacterium from an olive mill wastewater treatment digester. Int. J. Syst. Evol. Microbiol. 50, 1259-1264. http://ijs.sgmjournals.org/cgi/content/abstract/50/3/1259

118. Defnoun S, Labat M, Ambrosio M, Garcia J-L, Patel BKC (2000) Papillibacter cinnamivorans gen. nov., sp. nov., a cinnamate-transforming bacterium from a shea cake digester. Int. J. Syst. Evol. Microbiol. 50, 1221-1228. http://ijs.sgmjournals.org/cgi/content/abstract/50/3/1221

119. Baena S, Fardeau M-L, Labat M, Ollivier B, Garcia J-L, Patel BKC (2000) Aminobacterium mobile sp. nov., a new anaerobic amino-acid-degrading bacterium. Int. J. Syst. Evol. Microbiol. 50, 259-264. http://ijs.sgmjournals.org/cgi/content/abstract/50/1/259

120. Garcia J-L, Patel BKC, Fardeau M-L, Ravot G, Magot M, Cayol J-L, Ollivier B (2000) Thiosulfate reduction by non-sulfate-reducing anaerobic prokaryotes. Recent. Res. Devel. Microbiology 4, 701-724.

121. Koussémon M, Combet-Blanc Y, Patel BKC, Cayol J-L, Thomas P, Garcia J-L, Ollivier B (2001) Propionibacterium microaerophilum sp. nov.,a microaerophilic bacterium isolated from olive mill wastewater. Int. J. Syst. Evol. Microbiol. 51, 1373-1382.

122. Hernandez-Eugenio G, Fardeau M-L, Cayol J-L, Patel BKC, Thomas P, Macarie H, Garcia J-L, Ollivier B (2002) Sporanaerobacter acetigenes gen. nov., sp. nov., a novel acetogenic, facultatively sulfur-reducing bacterium. Int. J. Syst. Evol. Microbiol. 52, 1217-1223. http://ijs.sgmjournals.org/cgi/content/abstract/52/4/1217

123. Hernandez-Eugenio G, Fardeau M-L, Cayol J-L, Patel BKC, Thomas P, Macarie H, Garcia J-L, Ollivier B (2002) Clostridium thiosulfatireducens sp. nov., a proteolytic, thiosulfate- and sulfur-reducing bacterium isolated from an upflow anaerobic sludge blanket (UASB) reactor. Int. J. Syst. Evol. Microbiol. 52, 1461-1468. http://ijs.sgmjournals.org/cgi/content/abstract/52/5/1461

124. Cayol J-L, Fardeau M-L, Garcia J-L, Ollivier B (2002) Evidence of interspecies hydrogen transfer from glycerol in saline environments. Extremophiles, 6, 131-134.

125. Audiffrin C, Cayol J-L, Joulian C, Casalot L, Thomas P, Garcia J-L, Ollivier B (2003) Desulfonauticus submarinus gen. nov., sp. nov., a novel sulfate-reducing bacterium isolated from a deep-sea hydrothermal vent. Int. J. Syst. Evol. Microbiol. 53, 1585-1590. http://ijs.sgmjournals.org/cgi/content/abstract/53/5/1585

126. Alazard D, Dukan S., Urios A., Verhé F, Bouabida N., Morel F., Thomas P, Garcia J-L, Ollivier B (2003) Desulfovibrio hydrothermalis sp. nov., a novel sulfate-reducing bacterium isolated from hydrothermal vents. Int. J. Syst. Evol. Microbiol. 53,173-178. http://ijs.sgmjournals.org/cgi/content/abstract/53/1/173

127. Brisbarre N, Fardeau M-L, Cueff V, Cayol J-L, Barbier G, Cilia, V, Ravot G, Thomas P, Garcia J-L, Ollivier B (2003) Clostridium caminithermalis sp. nov., a slightly halophilic and moderately thermophilic bacterium isolated from an Atlantic deep-sea hydrothermal chimney. Int. J. Syst. Evol. Microbiol. 53, 1043-1049. http://ijs.sgmjournals.org/cgi/content/abstract/53/4/1043

128. Miranda-Tello E, Fardeau M-L, Fernández L, Ramírez F, Cayol J-L, Thomas P, Garcia J-L, Ollivier B. (2003) Desulfovibrio capillatus sp. nov., a novel sulfate-reducing bacterium isolated from an oil field separator located in the Gulf of Mexico. Anaerobe. 9, 97-103.

129. Bonilla Salinas M, Fardeau M-L, Cayrol J-L, Casalot L, Patel B.K.C., Thomas P, Garcia J-L, Ollivier B (2004) Petrobacter succinatimandens gen. nov., sp. nov., a moderately thermophilic, nitrate-reducing bacterium isolated from an Australian oil well. Int. J. Syst. Evol. Microbiol. 54, 645-649. http://ijs.sgmjournals.org/cgi/content/abstract/54/3/645

130. Fardeau M-L, Bonilla Salinas M, L'Haridon S., Jeanthon C., Verhé F, Cayrol J-L, Patel B.K.C., Garcia J-L, Ollivier B (2004) Isolation from oil reservoirs of novel thermophilic anaerobes phylogenetically related to Thermoanaerobacter subterraneus : reassignment of T. subterraneus, Thermoanaerobacter yonseiensis, Thermoanaerobacter tengcongensis and Carboxydibrachium pacificum to Caldanaerobacter subterraneus gen. nov., sp. nov., comb. nov. as four novel species. Int. J. Syst. Evol. Microbiol. 54, 467-474. http://ijs.sgmjournals.org/cgi/content/abstract/54/2/467

131. Miranda Tello E, Fardeau M-L, Thomas P, Ramirez F., Casalot L, Cayol J-L, Garcia J-L, Ollivier B (2004) Petrotoga mexicana sp. nov., a novel thermophilic, anaerobic and xylanolytic bacterium isolated from an oil-producing well in the Gulf of Mexico. Int. J. Syst. Evol. Microbiol. 54, 169-174. http://ijs.sgmjournals.org/cgi/content/abstract/54/1/169

Ouvrages et chapitres d'ouvrages

1. Garcia J-L (1978) Etude de la dénitrification dans les sols de rizière du Sénégal. Marseille : Université d'Aix-Marseille, 1978, 8, 189 p. Th. Sc. : UER scientifique de Luminy-Aix-Marseille II : 1978/01/12

2. Dommergues Y, Garcia J-L, Ganry F (1980) Microbiological considerations of the nitrogen cycle in west african ecosystems. In : Nitrogen cycling in west african ecosystems, Rosswall T. (ed.), Stockholm : SCOPE/UNEP. Royal Academy of Sciences, p. 55-72. IITA, 1978/12/11-15, Ibadan. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_02-03/02222.pdf

3. Garcia J-L, Tiedje JM (1982) Denitrification in rice soils. In : Dommergues Y, Diem H G (eds.), Microbiology of tropical soils and plant productivity. La Hague : M. Nijhoff, p. 187-208. (Developments in Plant and Soil Sciences 5). http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_14-15/17377.pdf

4. Belaich J-P, Bruschi M, Garcia J-L (1990) Microbiology and Biochemistry of Strict Anaerobes Involved in Interspecies Hydrogen Transfer. Federation of European Microbiology Societies (FEMS) Symposium n°54. Plenum Press, New York and London, pp.543. http://books.google.fr/books?id=rAB2t7UXKVYC&printsec=frontcover&dq=garcia+jean-louis&hl=fr&ei=MiUSTZnLOMWDOsWGlbcJ&sa=X&oi=book_result&ct=result&resnum=8&ved=0CEgQ6AEwBw#v=onepage&q&f=false

5. Guyot J-P, Monroy O, Noyola A, Garcia J-L (1992) Le traitement anaérobie des eaux résiduaires au Mexique. In : Pochat R , Turenne J-F, Serve M. de la (edS.), Environnement et développement durable : contribution de la recherche française dans les pays en développement. Paris : MRE, p. 69-70. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/divers09-06/35639.pdf

6. Hatchikian EC, Ollivier B, Garcia J-L (2001) Class I. Thermodesulfobacteria class. Nov. Order I. Thermodesulfobacteriales ord. Nov. Family I. Thermodesulfobacteriaceae fam. nov. In : Boone DR, Castenholz RW, Garrity GM (eds.), Bergey’s Manual of Systematic Bacteriology, second edition, Vol. 1 The Archaea and the Deeply Branching and Phototrophic Bacteria. Springer. p. 389-390.

7. Ollivier B, Patel BKC, Garcia J-L (2005) Genus I. Desulfohalobium. In : Brenner DJ, Krieg NR, Staley JT, Garrity GM. Bergey’s Manual of Systematic Bacteriology, second edition, Vol. 2 The Proteobacteria, Part C. Springer. p. 949-952.

8. Baena S, Garcia J-L, Cayol JL, Ollivier B (2009) The genus Aminomonas. In : Bergey’s Manual of Systematic Bacteriology, second edition, Vol 3, P. De Vos, G.M. Garrity, D. Jones, N. R. Krieg, W. Ludwig, F. A. Rainey, K.-H. Schleifer & W. B. Whitman. Baltimore: The Williams & Wilkins Co. p. 1167-1170.

9. Cayol JL, Garcia J-L, Ollivier B (2009) The genus Thermohalobacter. In : Bergey’s Manual of Systematic Bacteriology, second edition, Vol 3, P. De Vos, G.M. Garrity, D. Jones, N. R. Krieg, W. Ludwig, F. A. Rainey, K.-H. Schleifer & W. B. Whitman. Baltimore: The Williams & Wilkins Co. p. 848-850.

10. Cayol J-L, Ollivier B, Garcia J-L (2009) Genus Halothermothrix. In: Bergey’s Manual of Systematic Bacteriology, second edition, Vol. 3, P. De Vos, G.M. Garrity, D. Jones, N. R. Krieg, W. Ludwig, F. A. Rainey, K.-H. Schleifer & W. B. Whitman. Baltimore: The Williams & Wilkins Co. p. 1202-1205.

11. Grech-Mora I, Fardeau M-L, Garcia J-L, Ollivier B (2009) Genus Sporobacter. In: Bergey’s Manual of Systematic Bacteriology, second edition, Vol. 3, P. De Vos, G.M. Garrity, D. Jones, N. R. Krieg, W. Ludwig, F. A. Rainey, K.-H. Schleifer & W. B. Whitman. Baltimore: The Williams & Wilkins Co. p. 1034-1037.

12. Hernandez-Eugenio, Fardeau ML, Garcia J-L, Ollivier B (2009) The Genus Sporoanaerobacter. In : Bergey’s Manual of Systematic Bacteriology, second edition, Vol 3, P. De Vos, G.M. Garrity, D. Jones, N. R. Krieg, W. Ludwig, F. A. Rainey, K.-H. Schleifer & W. B. Whitman. Baltimore: The Williams & Wilkins Co. p. 1143-1146.

13. Ollivier B, Garcia J-L (2009) The genus Coprothermobacter. In : Bergey’s Manual of Systematic Bacteriology, second edition, Vol. 3, P. De Vos, G.M. Garrity, D. Jones, N. R. Krieg, W. Ludwig, F. A. Rainey, K.-H. Schleifer & W. B. Whitman. Baltimore: The Williams & Wilkins Co. p. 1271-1274.

14. Ravot G, Garcia J-L, Magot M, Ollivier B, (2009) The genus Fusibacter. In : Bergey’s Manual of Systematic Bacteriology, second edition, Vol. 3, P. De Vos, G. Garrity, D. Jones, N. R. Krieg, W. Ludwig, F. A. Rainey, K.-H. Schleifer & W. B. Whitman. Baltimore: The Williams & Wilkins Co. p. 1151-1153.

Communications

1. Garcia J-L (1975) La dénitrification dans la rhizosphère du riz. Bulletin de la Société Botanique de France 122, 131-138. Colloque sur la Rhizosphère, 1974/11/15-16, Paris. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_06-07/08647.pdf

2. Garcia J-L (1982) Relations between acidogenesis and the utilization of lactate, sulfate and nitrate during anaerobic digestion. In : Avances en Digestion Anaerobia : Simposio Internacional, 1982/10/25-27, Mexico, 20-30, ICAITI, Guatemala. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/b_fdi_04-05/03957.pdf

3. Brauman A, Labat M, Garcia J-L (1986) Contribution à l'étude de la microflore hétérotrophe de termites supérieurs à régimes alimentaires différenciés. In : Lesel R, Flanzy J (eds.), Microbiologie des organismes animaux poecilothermes. Bulletin Scientifique et Technique - INRA. Département d'Hydrobiologie, 1987 (22), p. 69-78. Colloque International Microbiologie des Organismes Animaux Peocilothermes, 1986/11/25, Paris.

4. Brauman A, Garcia J-L (1988) Mise en évidence d'une voie fermentative de dégradation du benzoate et du 3-hydroxybenzoate en anaérobiose. 4e Rencontres interdisciplinaires de Biochimie, Aix en Provence.

5. Belaich J-P, Heitz P, Rousset M, Garcia J-L (1989) Energetics of the growth of a new syntrophic benzoate degrading bacterium. FEMS International Symposium Microbiology and Biochemistry of Strict Anaerobes Involved in Interspecies Hydrogen Transfer, Marseille, 269-280, Belaich J-P, Bruschi M, Garcia J-L (eds.), Plenum Press, New York.

6. Brauman A, Labat M, Garcia J-L (1989) Preliminary studies on the gut microbiota of the soil-feeding termite Cubitermes speciosus . Colloque International Microbiologie des Pœcilothermes, Paris.

7. Garcia J-L (1989) Taxonomy and ecology of methanogens. 6th International Symposium Microbial Growth on C1 Compounds, Göttingen, RFA.

8. Gillis M, Garcia J-L, Dreyfus B (1989) Molecular genetics of Azorhizobium phenotypic and genotypic studies on tropical rhizobia leading to the characterization of Azorhizobium caulinodans. In : Sesbania rostrata.Wageningen (NLD), Dakar : CTA, ORSTOM, p. 19-22. Congrès International, 1989, Dakar.

9. Garcia J-L (1991) Ecologia de inoculos anaerobios especificos en el tratamiento de aguas residuales. II Seminario International sobre Biotechnologia en la Agroindustria Cafetera, Manizales, Colombie.

10. Ollivier B, Alazard D, Garcia J-L (1991) Fermentation méthanique thermophile de polymères biologiques par des cultures bactériennes mixtes définies. Journées nationales sur la digestion anaérobie, Narbonne.

11. Roger P A, Alazard D, Gaime Perraud I, Garcia J-L, Labat M, Roussos S (1999) Les recherches à l'IRD sur la dépollution et la valorisation de déchets agricoles et agro-industriels. In : L'environnement : une priorité pour l'agriculture : traiter et recycler les déchets. Salon International de l'Agriculture, 1999/03/01-06, Paris. Marseille : IRD, 13 p. multigr. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_6/b_fdi_49-50/010018094.pdf

Affiches

1. Ollivier B, Smiti N., Garcia J-L (1985) Thermophilic degradation of cellulose by a triculture of Clostridium thermocellum, Methanobacterium sp. and Methanosarcina MP. 4th International Symposium Anaerobic Digestion, Guangzhou, China, 557.

2. Ollivier B, Smiti N, Garcia J-L (1985) Thermophilic methanogenesis from gelatin by a mixed defined bacterial culture. 4th International Symposium Anaerobic Digestion, Guangzhou, China, 430.

3. Ollivier B, Smiti N, Garcia J-L (1985) Thermophilic methanogenesis from sugar beet pulps by a mixed defined bacterial culture. 4th International Symposium Anaerobic Digestion, Guangzhou, China, 558.

4. Bourdel C, Garcia J-L, Belaich JP (1986) Fermentation méthanique du benzoate par des cultures syntrophiques de bactéries anaérobies. 1er Congrés Société Française de Microbiologie, Toulouse.

5. Qatibi AI, Bories A, Garcia J-L (1988) Glycerol fermentation and sulfate utilization during the anaerobic digestion process. 8th International Biotechnology Symposium, Paris, 246.

6. Anoko Lawson AS, Ollivier B, Garcia J-L (1989) Partial characterization of three thermophilic hydrogenotrophic methanogens isolated from butyrate enrichments. 6th International Symposium Microbial Growth on C1 Compounds, Göttingen, RFA.

7. Ollivier B, Hatchikian CE, Prensier G, Guezenec J, Garcia J-L (1989) Characterization of a sulfate-reducing bacterium isolated from a hypersaline african lake. FEMS International Symposium Microbiology and Biochemistry of Strict Anaerobes Involved in Interspecies Hydrogen Transfer, Marseille,435-437, Belaich JP, Bruschi M, Garcia JL, eds, Plenum Press, New York..

8. Qatibi AI, Cayol J-L, Garcia J-L (1989) Glycerol degradation by Desulfovibrio sp. in pure culture and in coculture with Methanospirillum hungatei . FEMS International Symposium Microbiology and Biochemistry of Strict Anaerobes Involved in Interspecies Hydrogen Transfer, Marseille, 447-449, Belaich JP, Bruschi M, Garcia JL, eds, Plenum Press, New York.

9. Qatibi AI, Cayol J-L, Garcia J-L (1989) 1,2- and 1,3-propanediol degradation by Desulfovibrio alcoholovorans sp.nov. in pure culture or through H2 interspecies transfer. FEMS International Symposium Microbiology and Biochemistry of Strict Anaerobes Involved in Interspecies Hydrogen Transfer, Marseille, 451-453, Belaich JP, Bruschi M, Garcia JL, eds, Plenum Press, New York.

10. Ragot M, Ollivier B, Garcia J-L (1989) Long chain fatty acids degradation by mesophilic syntrophic coculture isolated from margin. FEMS International Symposium Microbiology and Biochemistry of Strict Anaerobes Involved in Interspecies Hydrogen Transfer, Marseille, 455-457, Belaich JP, Bruschi M, Garcia JL, eds, Plenum Press, New York.

11. Brauman A, Garcia J-L (1991) Isolation of a new 3-hydroxybenzoate-fermenting bacterium from hindguts of a soil-feeding termite, Cubitermes speciosus . 91st General Meeting of American Society for Microbiology, Dallas, USA.

12. Cayol J-L, Ollivier B, Magot M, Grimont PAD, Garcia J-L (1992) Isolement et caractérisation de deux bactéries fermentaires anaérobies strictes d'un environnement hypersalé. 3e Congrès National de la Société Française de Microbiologie, Lyon.

13. Ollivier B, Cayol J-L, Magot M, Garcia J-L (1992) Isolement de bactéries méthanogènes d'un forage pétrolier. 3e Congrès National de la Société Française de Microbiologie, Lyon.

14. Fardeau M-L, Ollivier B, Soubrane A, Prensier G, Sauve P, Garcia J-L, Belaich J-P (1992) Isolement et étude d'une bactérie syntrophique dégradant le benzoate. 3e Congrès National de la Société Française de Microbiologie, Lyon.

15. Alazard D, Ollivier B, Pollet I, Garcia J-L (1992) Effect of formate utilization by a methanogen on growth of a thermophilic heterolactic bacterium. International Conference on Thermophiles: Science and Technology, Reykjavik, Iceland.

16. Cayol, J-L, Ollivier B, Prensier G, Guezennec J, Patel B, Garcia J-L (1993) Isolation of a thermophilic anaerobic halophilic fermentative bacterium from a tunisian chott, abstr. I88, p. Abstr. 93rd Annual Meeting of American Society for Microbiology, Atlanta, USA.

17. Cayol J-L, Fardeau M-L, Faudon C, Magot M, Garcia J-L, Ollivier B (1993) Effect of thiosulfate as electron acceptor on glucose oxidation by two Thermoanaerobacter strains. P41, International Conference on the Science and Technology of Thermophiles, Hamilton, New Zealand.

18. Hernandez G, Fardeau M-L, Patel BKC, Macarie H, Garcia J-L, Ollivier B (1998) Aislamiento y caracterizacion de bacterias tiosulfato reductoras no sulfato reductoras en digestores anaerobios mesofilicos. In :Tratamiento anaerobio de aguas residuales : taller y seminario latinoamericano. Mexico : ORSTOM, 8 p. multigr. Wastewater Anaerobic Treatment : Latin-American Workshop-Seminar, 5, 1998/10/27-30, Vina del Mar, Chili. A18-pdf

Brevet

1. Combet-Blanc Y, Ollivier B, Garcia JL (1994) Nouvelle souche bactérienne phylogénétiquement proche du genre Lactobacillus et du genre Bacillus. Procédé de culture et application. Brevet FR 94.00485.

Rapports

1. Garcia J-L (1967) Techniques modernes d'étude de la rhizosphère : rapport de stages effectués à Cadarache, Prague et Nancy. ORSTOM, 122 p. multigr.

2. Garcia J-L (1969) Etude de la dénitrification dans la rhizosphère du riz : rapport de stage 1968-1969. Dakar : ORSTOM, 63 p. multigr. http://horizon.documentation.ird.fr/exl-doc/pleins_textes/num-dakar-02/14502.pdf

3. Grandin G, Garcia J-L (1982) L'indépendance énergétique. In : Compte-rendu des journées d'études de l'ORSTOM. Paris : ORSTOM, p. 123-145. Journées d'Etudes de l'ORSTOM, 1982/07/06-10, Paris.

4. Garcia J-L, Guyot J-P, Ollivier B, Trad M, Paycheng C (1982) Production de méthane à partir de résidus solides d'industries agro- alimentaires. IRCHA-Vert-le-Petit : ORSTOM, 54 p. multigr.

5. Garcia J-L (1983) La fermentation méthanique. Paris : ORSTOM, 48 p. multigr.

6. Garcia J-L, Guyot J-P, Ollivier B, Labat M, Paycheng C (1983) Recherche sur la production de méthane à partir de résidus solides d'industries agro-alimentaires : compte-rendu final d'une recherche financée par le COMES. IRCHA-Vert-le-Petit : ORSTOM, 24 + 166 p. multigr.

 


BIBLIOGRAPHIE DE PIERRE ROGER

http://pierre-armand-roger.fr/publications/index.htm


BIBLIOGRAPHIE DE JEAN-LUC CAYOL

Articles dans une revue

1. Qatibi AI, Cayol J-L, Garcia J-L (1991) Glycerol and diol degradation by Desulfovibrio alcoholovorans in pure culture, in the presence of sulfate, or in syntrophic association with Methanospirillum . FEMS Microbiol. Ecol. 85, 233-240.

2. Fardeau M-L, Cayol J-L, Magot M, Ollivier B (1993) Hydrogen oxidation in the presence of thiosulfate, by a Thermoanaerobacter strain isolated from an oil-producing well. FEMS Microbiol. Lett. 113, 327-332.

3. Cayol J-L, Ollivier B, Lawson Anani Soh A, Fardeau M-L, Ageron E, Grimont PAD, Prensier G, Guezennec J, Magot M, Garcia J-L (1994) Haloincola saccharolytica subsp. senegalensis subsp. nov., isolated from the sediments of a hypersaline lake, and emended description of Haloincola saccharolytica. Int. J. Syst. Bacteriol. 44, 805-811.

4. Cayol J-L, Ollivier B, Patel BKC, Prensier G, Guezennec J, Garcia J-L (1994) Isolation and characterization of Halothermothrix orenii gen. nov., sp. nov., a halophilic, thermophilic, fermentative strictly anaerobic bacterium. Int. J. Syst. Bacteriol. 44, 534-540.

5. Fardeau M-L, Cayol J-L, Magot M, Ollivier B (1994) Hydrogen oxidation abilities in the presence of thiosulfate as electron acceptor within the genus Thermoanaerobacter. Curr. Microbiol. 29, 269-272.

6. Cayol J-L, Ollivier B, Patel BKC, Ravot G, Magot M, Ageron E, Grimont PAD, Garcia J-L (1995) Description of Thermoanaerobacter brockii subsp. lactiethylicus subsp. nov. isolated from a deep subsurface french oil well : a proposal to reclassify Thermoanaerobacter finnii as Thermoanaerobacter brockii subsp. finnii comb. nov. and an emended description of Thermoanaerobacter brockii. Int. J. Syst.Bacteriol. 45, 783-789.

7. Cayol J-L, Ollivier B, Patel BKC, Ageron E, Grimont PAD, Prensier G, Garcia J-L (1995) Haloanaerobium lacusroseus sp. nov., an extremely halophilic fermentative bacterium from the sediments of a hypersaline lake. Int. J. Syst. Bacteriol. 45, 790-797.

8. Tsai CR, Garcia J-L, Patel BKC, Cayol J-L, Baresi L, Mah RA (1995) Haloanaerobium alcaliphilum sp. nov., an anaerobic moderate halophile from the sediments of Great Salt Lake, Utah. Int. J. Syst. Bacteriol. 45, 301-307.

9. Fardeau M-L, Faudon C, Cayol J-L, Magot M, Patel BKC, Ollivier B (1996) Effect of thiosulfate as electron acceptor on glucose and xylose oxidation by Thermoanaerobacter finnii and a Thermoanaerobacter sp. isolate from oil field water. Res. Microbiol. 147, 159-165.

10. Ollivier B, Cayol J-L, Patel BKC, Magot M, Fardeau M-L, Garcia J-L (1997) Methanoplanus petrolearius sp. nov., a novel methanogenic bacterium from an oil-producing well. FEMS Microbiol. Lett. 147, 51-56.

11. Tsu IH, Huang CY, Garcia J-L, Patel BKC, Cayol J-L, Baresi L, Mah RA (1998) Isolation and characterization of Desulfovibrio senezii sp. nov., a halotolerant sulfate reducer from a solar saltern and phylogenetic confirmation of Desulfovibrio fructosovorans as a new species. Arch. Microbiol. 170, 313-317.

12. Ollivier B, Fardeau M-L, Cayol J-L, Magot M, Patel BKC, Prensier G, Garcia J-L (1998) Methanocalculus halotolerans gen. nov., sp. nov., isolated from an oil-producing well. Int. J. Syst. Bacteriol. 48, 821-828.

13. Ouattara AS, Patel BKC, Cayol J-L, Cuzin N, Traore AS, Garcia J-L (1999) Isolation and characterization of Desulfovibrio burkinensis sp. nov. from an african ricefield, and phylogeny of Desulfovibrio alcoholivorans. Int. J. Syst. Bacteriol. 49, 639-643.

14. Huang CY, Garcia J-L, Patel BKC, Cayol J-L, Baresi L, Mah RA (2000) Salinivibrio costicola subsp. vallismortis subsp. nov., a halotolerant facultative anaerobe from Death Valley, and emended description of Salinivibrio costicola. Int. J. Syst. Evol. Microbiol. 50, 615-622.

15. Cayol J-L, Ducerf S, Patel BKC, Garcia J-L, Thomas P, Ollivier B (2000) Thermohalobacter berrensis gen. nov., sp. nov., a thermophilic, strictly halophilic bacterium from a solar saltern. Int. J. Syst. Evol. Microbiol. 50, 559-564.

16. Garcia J-L, Patel BKC, Fardeau M-L, Ravot G, Magot M, Cayol J-L, Ollivier B (2000) Thiosulfate reduction by non-sulfate-reducing anaerobic prokaryotes. Recent. Res. Devel. Microbiology 4, 701-724.

17. Escoffier S, Cayol J-L, Ollivier B, Patel BKC, Fardeau M-L, Thomas P, Roger P (2001) Identification of thiosulfate- and sulfur-reducing bacteria unable to reduce sulfate in ricefield soils. nov. Eur. J. Soil Biol. 37, 145-156.

18. Koussémon M, Combet-Blanc Y, Patel BKC, Cayol J-L, Thomas P, Garcia J-L, Ollivier B (2001) Propionibacterium microaerophilum sp. nov.,a microaerophilic bacterium isolated from olive mill wastewater. Int. J. Syst. Evol. Microbiol. 51, 1373-1382.

19. Cayol J-L, Fardeau M-L, Garcia J-L, Ollivier B (2002) Evidence of interspecies hydrogen transfer from glycerol in saline environments. Extremophiles, 6, 131-134.

20. Hernandez-Eugenio G, Fardeau M-L, Cayol J-L, Patel BKC, Thomas P, Macarie H, Garcia J-L, Ollivier B (2002) Sporanaerobacter acetigenes gen. nov., sp. nov., a novel acetogenic, facultatively sulfur-reducing bacterium. Int. J. Syst. Evol. Microbiol. 52, 1217-1223.

21. Hernandez-Eugenio G, Fardeau M-L, Cayol J-L, Patel BKC, Thomas P, Macarie H, Garcia J-L, Ollivier B (2002) Clostridium thiosulfatireducens sp. nov., a proteolytic, thiosulfate- and sulfur-reducing bacterium isolated from an upflow anaerobic sludge blanket (UASB) reactor. Int. J. Syst. Evol. Microbiol. 52, 1461-1468.

22. Lomascolo A, Cayol J-L, Roche M, Guo L, Robert J-L, Record E, Lesage-Meessen L, Ollivier B, Sigoillot J-C, Asther M (2002) Molecular clustering of pycnoporus strains from various geographic origins and isolation of monokaryotic strains for laccase hyperproduction. Mycol. Res. 106, 1193-1203.

23. Assih EA, Ouattara AS, Thierry S, Cayol J-L, Labat M, Macarie H (2002) Stenotrophomonas acidaminiphila sp. nov., a strictly aerobic bacterium isolated from an upflow anaerobic sludge blanket (UASB) reactor. Int. J. Syst. Evol. Microbiol. 52, 559-568.

24. Brisbarre N, Fardeau M-L, Cueff V, Cayol J-L, Barbier G, Cilia, V, Ravot G, Thomas P, Garcia J-L, Ollivier B (2003) Clostridium caminithermalis sp. nov., a slightly halophilic and moderately thermophilic bacterium isolated from an Atlantic deep-sea hydrothermal chimney. Int. J. Syst. Evol. Microbiol. 53, 1043-1049.

25. Ouattara S, Assih EA, Thierry S, Cayol J-L, Labat M, Monroy O, Macarie H (2003) Bosea minatitlanensis sp. nov., a strictly aerobic bacterium isolated from an anaerobic digester. Int. J. Syst. Evol. Microbiol. 53, 1247-1251.

26. Miranda-Tello E, Fardeau M-L, Fernández L, Ramírez F, Cayol J-L, Thomas P, Garcia J-L, Ollivier B. (2003) Desulfovibrio capillatus sp. nov., a novel sulfate-reducing bacterium isolated from an oil field separator located in the Gulf of Mexico. Anaerobe. 9, 97-103.

27. Audiffrin C, Cayol J-L, Joulian C, Casalot L, Thomas P, Garcia J-L, Ollivier B (2003) Desulfonauticus submarinus gen. nov., sp. nov., a novel sulfate-reducing bacterium isolated from a deep-sea hydrothermal vent. Int. J. Syst. Evol. Microbiol. 53, 1585-1590.

28. Miranda-Tello E, Fardeau M-L, Sepúlveda J, Fernández L, Cayol J-L, Thomas P, Ollivier B.(2003) Garciella nitratireducens gen. nov., sp. nov., an anaerobic, thermophilic, nitrate- and thiosulfate-reducing bacterium isolated from an oilfield separator in the Gulf of Mexico. Int. J. Syst. Evol. Microbiol. 53, 1509-1514.

29. Cravo-Laureau C, Matheron R, Cayol J-L, Joulian C, Hirschler-Réa A. (2004) Desulfatibacillum aliphaticivorans gen. nov., sp. nov., an n-alkane- and n-alkene-degrading, sulfate-reducing bacterium. Int. J. Syst. Evol. Microbiol. 54, 77-83.

30. Bonilla Salinas M, Fardeau M-L, Cayrol J-L, Casalot L, Patel B.K.C., Thomas P, Garcia J-L, Ollivier B (2004) Petrobacter succinatimandens gen. nov., sp. nov., a moderately thermophilic, nitrate-reducing bacterium isolated from an Australian oil well. Int. J. Syst. Evol. Microbiol. 54, 645-649.

31. Fardeau M-L, Bonilla Salinas M, L'Haridon S., Jeanthon C., Verhé F, Cayol J-L, Patel B.K.C., Garcia J-L, Ollivier B (2004) Isolation from oil reservoirs of novel thermophilic anaerobes phylogenetically related to Thermoanaerobacter subterraneus : reassignment of T. subterraneus, Thermoanaerobacter yonseiensis, Thermoanaerobacter tengcongensis and Carboxydibrachium pacificum to Caldanaerobacter subterraneus gen. nov., sp. nov., comb. nov. as four novel species. Int. J. Syst. Evol. Microbiol. 54, 467-474.

32. Miranda Tello E, Fardeau M-L, Thomas P, Ramirez F., Casalot L, Cayol J-L, Garcia J-L, Ollivier B (2004) Petrotoga mexicana sp. nov., a novel thermophilic, anaerobic and xylanolytic bacterium isolated from an oil-producing well in the Gulf of Mexico. Int. J. Syst. Evol. Microbiol. 54, 169-174.

33. Cravo-Laureau C, Matheron R, Joulian C, Cayol J-L, Hirschler-Réa A. (2004) Desulfatibacillum alkenivorans sp. nov., a novel n-alkene-degrading, sulfate-reducing bacterium, and emended description of the genus Desulfatibacillum. Int. J. Syst. Evol. Microbiol. 54, 1639-1642.

34. Bonilla Salinas M, Fardeau M-L, Thomas P, Cayol J-L, Patel BKC, Ollivier B (2004) Mahella australiensis gen. nov., sp. nov., a moderately thermophilic, anaerobic bacterium isolated from an Australian oil well. Int. J. Syst. Evol. Microbiol. 54, 2169-2173.

35. Bhatnagar T, Boutaiba S, Hacene H, Cayol J-L, Fardeau M-L, Ollivier B, Baratti JC (2005) Lipolytic activity from Halobacteria: screening and hydrolase production. FEMS Microbiology Letters 248, 133-140.

36. Klouche N, Fardeau M-L, Lascourrèges JF, Cayol J-L, Hacene H, Thomas P, Magot M (2007) Geosporobacter subterraneus gen. nov., sp. nov. a spore-forming bacterium isolated from a deep subsurface aquifer. Int. J. Syst. Evol. Microbiol. 57,1757-1761.

37. Crapart S, Fardeau M-L, Cayol J-L, Thomas P, Sery C, Ollivier B, Combet Blanc Y (2007) Exiguobacterium profundum sp. nov., novel moderately thermophilic lactic acid-producing bacterium isolated from a deep-sea hydrothermal vent. Int. J. Syst. Evol. Microbiol. 57, 287-292.

38. Alazard D, Badillo C, Fardeau M-L, Cayol J-L, Roldan T, Thomas P, Tholozan J-L, Ollivier B (2007) Tindallia texcocoensis sp. nov., a new haloalkaliphilic bacterium isolated from lake texcoco, Mexico. Extremophiles 11, 33-39.

39. Sadfi-Zouaoui N, Essghaier B, Hajlaoui R, Fardeau M-L, Cayol J-L, Ollivier B, Boudabous A (2008) Ability of moderately halophilic bacteria to control grey mould disease on tomato fruits. J. Phytopath. 156, 42-52.

40. Liebgott PP, Joseph M, Fardeau M-L, Cayol J-L, Falsen E, Chamkh F, Qatibi AI, Labat M (2008) Clostridiisalibacter paucivorans gen. nov. sp. nov., a novel moderately halophilic bacterium isolated from olive mill wastewater. Int. J. Syst. Evol. Microbiol. 58, 61-67.

41. Haouari O, Fardeau M-L, Cayol J-L, Casiot C, Elbaz-Poulichet F, Hamdi M, Joseph M, Ollivier B (2008) Desulfotomaculum hydrothermale sp. nov., a new thermophilic sulfate-reducing bacterium isolated from a terrestrial Tunisian hot spring. Int. J. Syst. Evol. Microbiol. 58, 2529-2535.

42. Haouari O, Fardeau M-L, Cayol J-L, Fauque G, Casiot C, Elbaz-Poulichet F, Hamdi M, Ollivier B (2008) Thermodesulfovibrio hydrogeniphilus sp. nov., a new thermophilic sulphate-reducing bacterium isolated from a Tunisian hot spring. Systematic and Applied Microbiology 31, 38-42.

43. Hedi A, Fardeau M-L, Sadfi N, Boudabous A, Ollivier B, Cayol J-L (2008) Characterization of Haloanaerobaculum tunisiense gen. nov., sp. nov., a new extremely halophilic fermentative, strictly anaerobic bacterium isolated from a hypersaline lake in Tunisia. Extremophiles 13, 313-319.

44. Fardeau M-L, Goulhen F, Bruschi M, Khelifi N, Cayol J-L, Ignatidis I, Guyot F, Ollivier B (2009) Archaeoglobus fulgidus and Thermotoga elfii, thermophilic isolates from deep geothermal water of the Paris Basin. Geomicrobiol. J. Geomicrobiology J. 36, 119-130.

45. Ben Dhia Thabet O, T wafa El Taief K, Cayol J-L, Hamdi M, Fauque G, Fardeau M-L (2009) Desulfovibrio legalis sp. nov.: a moderated halophilic sulfate-reducing bacterium isolated from a wastewater digestor in Tunisia. Curr. Microbiol. published online 03 september 2010.

46. Khelifi E, Bouallagui H , Fardeau M--L, Godon JJ, Touhami Y, Cayol J-L, Ollivier B, Hamdi M (2009) Methanogens and sulphate reducing bacteria associated with treatment of an industrial dye effluent in an up flow anaerobic fixed bed bioreactor. Biochem. Engeneering J. (sous presse)

47. Ben Dhia Thabet O, Bouallagui H, Cayol J-L, Ollivier B, Fardeau M-L, Hamdi M (2009) Anaerobic degradation of landfill leachate using an upflow anaerobic fixed-bed reactor with microbial reduction of sulphate. J. Hazard. Materials (sous presse)

48. Klouche N, Basso O, Lascoureges J-F, Cayol J-L, Tomas P, Fauque G, Fardeau M-L, Magot M (2009) Desulfocurvus vexinensis gen. nov., sp. nov., a novel sulfate-reducing bacterium isolated from a deep subsurface aquifer. Int. J. Syst. Evol. Microbiol. 59, 3100-3104.

49. Benmalek Y, Cayol J-L, Bouanane NA, Hacene H, Fauque G, Fardeau M-L (2009) Chryseobacterium solincola sp. nov., isolated from soil. Int. J. Syst. Evol. Microbiol. 60,1876-1880.

50. Berlendis S, Cayol J-L, Verhé F, Laveau S, Tholozan J-L, Ollivier B, Auria R (2009) First evidence of aerobic biodegradation of BTEX compounds by pure cultures of Marinobacter. Appl. Biochem. Biotechnol. (sous presse)

51. Hedi A, Sadfi N, Fardeau M-L, Rebib H, Cayol J-L, Ollivier B, Boudabous A (2009) Studies on the biodiversity of halophilic microorganisms isolated from El-Djerid Salt lake (Tunisia) under aerobic conditions. Int. J. Syst. Evol. Microbiol. (sous presse)

52. Essghaier B, Fardeau M-L, Cayol J-L, Hajlaoui MR, Boudabous A, Jijakli H, Sadfi-Zouaoui N (2009) Biological control of grey mould in strawberry fruits by halophilic bacteria. J. Appl. Microbiol. 106, 833-846.

53. Alazard D, Joseph M, Battaglia-Brunet F, Cayol J-L, Ollivier B (2010) Desulfosporosinus acidiphilus sp. nov. : a moderately acidophilic sulfate-reducing bacterium isolated from acid mining drainage sediments. Extremophiles 14, 304-312.

54. Benmalek Y, Cayol J-L, Bouanane NA, Hacene H, Fauque G, Fardeau M-L (2010) Chryseobacterium solincola sp. nov., isolated from oil. Int. J. Syst. Evol. Microbiol. 60, 1876-1880.

55. Berlendis S, Cayol J-L, Verhé F, Laveau S, Tholozan J-L, Ollivier B, Auria R (2010) First Evidence of Aerobic Biodegradation of BTEX Compounds by Pure Cultures of Marinobacter. Appl. Biochem. Biotech. 160, 1992-1999.

56. Fardeau M-L, Barsotti V, Cayol J-L, Guasco S, Michotey V, Joseph M, Bonin P, Ollivier B (2010) Caldinitratiruptor microaerophilus, gen. nov., sp. nov. isolated from a French hot spring (Chaudes Aigues, Massif Central) : a novel cultivated facultative microaerophilic anaerobic thermophile pertaining to the Symbiobacterium branch within the Firmicutes. Extremophiles 14, 241-247.

57. Rezgui R, Ben Hamed S, Ben Ali Gam Z, Fardeau M-L, Cayol J-L, Maaroufi A, Labat M (2010) Sporosalibacterium faouarense gen. nov., sp. nov., a novel moderately halophilic bacterium isolated from an oil-contaminated soil of south Tunisia. Int. J. Syst. Evol. Microbiol. (sous presse)

58. Ben Dhia Thabet O, Wafa T, Eltaief K, Cayol J-L, Hamdi M, Fauque G, Fardeau ML (2010) Desulfovibrio legallis sp. nov.: a moderately halophilic, sulphate-reducing bacterium Isolated from a wastewater digestor in Tunisia. Current Microbiology. Doi 10.1007/s00284-010-9733-z.

59. Bouanane-Darenfed A, Fardeau ML, Gregoire P, Joseph M, Kebbouche-Gana S, Benayad T, Hacene H, Cayol J-L, Ollivier B (2010) Caldicoprobacter algeriensis sp. nov. a new thermophilic anaerobic, xylanolytic bacterium isolated from an Algerian hot spring. Curr. Microbiol. Doi.: 10.1007/s00284-010-9789-9.

Ouvrages et chapitres d'ouvrages

1. Ollivier B, Cayol J-L (2005) The fermentative, iron-reducing, and nitrate-reducing microorganisms. In Petroleum microbiology. B. Ollivier, M. Magot, Eds. ASM press, Washington USA.

2. Ollivier B, Cayol J-L, Fauque G (2007) Sulphate-reducing bacteria from oil fields environments and deep-sea hydrothermal vents. In Sulphate-Reducing Bacteria : Environmental and Engineered Systems. L. Barton, W. Hamilton, Eds Chapter 10, Cambridge University Press, London, p. 305-328.

3. Ollivier B, Cayol J-L (2009) Thermophilic methanoarchaea inhabiting hot ecosystems. In Handbook of Hydrocarbon Microbiology: Microbial Interactions with Hydrocarbons, Oils, Fats and Related Hydrophobic Substrates and Products, Springer Verlag.

4. Baena S, Garcia J-L, Cayol J-L, Ollivier B (2009) The genus Aminomonas. Bergey’s Manual of Systematic Bacteriology, vol 3, P. De Vos, G. Garrity, D. Jones, N. R. Krieg, W. Ludwig, F. A. Rainey, K.-H. Schleifer & W. B. Whitman. Baltimore: The Williams & Wilkins Co. p. 1167-1170.

5. Bonilla-Salinas M, Ollivier B, Patel BKC, Cayol J-L (2009) The genus Mahella. Bergey’s Manual of Systematic Bacteriology vol 3, P. De Vos, G. Garrity, D. Jones, N. R. Krieg, W. Ludwig, F. A. Rainey, K.-H. Schleifer & W. B. Whitman. Baltimore: The Williams & Wilkins Co. p. 1296-1298.

6. Cayol J-L, Garcia JL, Ollivier B (2009) The genus Thermohalobacter. Bergey’s Manual of Systematic Bacteriology, vol 3, P. De Vos, G. Garrity, D. Jones, N. R. Krieg, W. Ludwig, F. A. Rainey, K.-H. Schleifer & W. B. Whitman. Baltimore: The Williams & Wilkins Co. p. 848-850.

7. Cayol J-L, Ollivier B, Garcia J-L (2009) Genus Halothermothrix. In Bergey’s Manual of Systematic Bacteriology, Vol. 3, P. De Vos, G. Garrity, D. Jones, N. R. Krieg, W. Ludwig, F. A. Rainey, K.-H. Schleifer & W. B. Whitman. Baltimore: The Williams & Wilkins Co. p. 1202-1205.

8. Fardeau ML, Ollivier B, Cayol J-L (2009) The genus Caldanaerobacter. Bergey’s Manual of Systematic Bacteriology Vol 3, P. De Vos, G. Garrity, D. Jones, N. R. Krieg, W. Ludwig, F. A. Rainey, K.-H. Schleifer & W. B. Whitman. Baltimore: The Williams & Wilkins Co. p. 1241-1244.

 

 

 

Accueil
Introduction
Classification résumée
Classification générale
Liste alphabétique

Groupes trophiques spéciaux

Classification de Cavalier-Smith
Conclusion
Biblio
Plan du site
 
Synonymes