Genre, Taxons d'appartenance |
Espèce type |
Métabolisme
|
Ecol.
|
O2
|
Nb. spp
|
|
Quadricoccus, Rhodocyclaceae, Rhodocyclales, Beta-proteobacteria, Bacteria |
Quadricoccus australiensis |
HET
|
DUL
|
A
|
1
|
|
Quadrisphaera, Kineosporiaceae, Kineosporineae, Actinomycetales, Actinobacteria, Bacteria |
Quadrisphaera granulorum |
HET
|
DUL
|
A
|
1
|
|
Quatrionicoccus = Quadricoccus |
Quadricoccus australiensis |
HET
|
DUL
|
A
|
1
|
|
Quinella, Veillonellaceae, Selenomonadales, Negativicutes, Firmicutes, Bacteria |
Quinella ovalis |
HET
|
TUB
|
AN
|
1
|
|
Rahnella, Enterobacteriaceae, Enterobacteriales, Gamma-proteobacteria, Bacteria |
Rahnella aquatilis |
HET
|
DUL,CLI
|
F
|
1
|
|
Ralstonia, Ralstoniaceae, Burkholderiales, Beta-proteobacteria, Bacteria |
Ralstonia pickettii |
HET
|
CLI
|
A
|
5
|
|
Ramlibacter, Comamonadaceae, Burkholderiales, Beta-proteobacteria, Bacteria |
Ramlibacter tataouinensis |
HET
|
TEL
|
A
|
2
|
|
Raoultella, Enterobacteriaceae, Enterobacteriales, Gamma-proteobacteria, Bacteria |
Raoultella planticolla |
HET
|
UBI,CLI
|
F
|
3
|
|
Rapidithrix, Flammeovirgaceae, Cytophagales, Cytophagia, Bacteroidetes, Bacteria |
Rapidithrix thailandica |
HET
|
MAR
|
A
|
1
|
|
Rarobacter, Rarobacteraceae, Micrococcineae, Actinomycetales, Actinobacteria, Bacteria |
Rarobacter faecitabidus |
HET
|
?
|
F
|
2
|
|
Rathayibacter, Microbacteriaceae, Micrococcineae, Actinomycetales, Actinobacteria, Bacteria |
Rathayibacter rathayi |
HET
|
PAT
|
A
|
6
|
|
Reichenbachia = Reichenbachiella |
Reichenbachia agariperforans |
|
|
|
|
|
Reichenbachiella, Flammeovirgaceae, Cytophagales, Cytophagia, Bacteroidetes, Bacteria |
Reichenbachiella agariperforans |
HET
|
MAR
|
A
|
1
|
|
Reinekea, Oceanospirillaceae, Oceanospirillales, Gamma-Proteobacteria, Bacteria |
Reinekea marinisedimentorum |
HET
|
MAR
|
F
|
1
|
|
Renibacterium, Micrococcaceae, Micrococcineae, Actinomycetales, Actinobacteria, Bacteria |
Renibacterium salmoninarum |
HET
|
PAT
|
A
|
1
|
|
Reyranella, Alpha-proteobacteria, Proteobacteria, Bacteria |
Reyranella massiliensis |
HET |
DUL |
M |
1 |
|
Rhabdochromatium, Chromatiaceae, Chromatiales, Gamma-proteobacteria, Bacteria |
Rhabdochromatium marinum |
SOX, PHO
|
MAR
|
AN
|
1
|
|
Rhabdothermus, Thermaceae, Thermales, Deinococci, Deinococcus-Thermus, Bacteria |
Rhabdothermus arcticus |
SOR,HET |
MAR,THE |
A,AN |
1 |
|
Rheinheimera, Chromatiaceae, Chromatiales, Gamma-Proteobacteria, Bacteria |
Rheinheimera baltica |
HET
|
MAR
|
A
|
3
|
|
Rhizobacter, Pseudomonadaceae, Pseudomonadales, Gamma-proteobacteria, Bacteria |
Rhizobacter dauci |
HET
|
TEL,PAT
|
A
|
1
|
|
Rhizobium, Rhizobiaceae, Rhizobiales, Alpha-proteobacteria, Bacteria |
Rhizobium leguminosarum |
FIX
|
TEL
|
A
|
23
|
|
Rhizomicrobium, Alpha-proteobacteria, Bacteria |
Rhizomicrobium palustre |
HET |
TEL |
F |
1 |
|
Rhizomonas = Sphingomonas |
Rhodanobacter, Xanthomonadaceae, Xanthomonadales, Gamma-proteobacteria, Bacteria |
Rhodanobacter lindaniclasticus |
HET
|
TEL
|
A
|
3
|
|
Rhodobaca, Rhodobacteraceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Rhodobaca bogoriensis |
HET
|
DUL,ALC
|
A
|
1
|
|
Rhodobacter, Rhodobacteraceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Rhodobacter capsulatus |
PHO
|
DUL, TEL
|
A
|
6
|
|
Rhodobium, Rhodobiaceae, Rhizobiales, Alpha-proteobacteria, Bacteria |
Rhodobium orientis |
PHO, HET
|
MAR
|
A
|
3
|
|
Rhodoblastus, Bradyrhizobiaceae, Rhizobiales, Alpha-proteobacteria, Bacteria |
Rhodoblastus acidophilus |
PHO, HET
|
DUL
|
A
|
2
|
|
Rhodocista = Rhodospirillum |
Rhodococcus, Nocardiaceae, Corynebacterineae, Actinomycetales, Actinobacteria, Bacteria |
Rhodococcus rhodochrous |
HET
|
TEL,PAT
|
A
|
25
|
|
Rhodocyclus, Rhodocyclaceae, Rhodocyclales, Beta-proteobacteria, Bacteria |
Rhodocyclus purpureus |
HET
|
DUL
|
A
|
3
|
|
Rhodocytophaga, Cytophagaceae, Cytophagales, Cytophagia, Bacteroidetes, Bacteria |
Rhodocytophaga aerolata |
HET |
TEL |
A |
1 |
|
Rhodoferax, Comamonadaceae, Burkholderiales, Beta-proteobacteria, Bacteria |
Rhodoferax fermentans |
HET, PHO
|
DUL
|
A
|
3
|
|
Rhodoglobus, Microbacteriaceae, Micrococcineae, Actinomycetales, Actinobacteria, Bacteria |
Rhodoglobus vestalii |
HET
|
DUL
|
A
|
1
|
|
Rhodoligotrophos, Rhodobiaceae, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria |
Rhodoligotrophos appendicifer |
HET |
DUL |
A,M |
1 |
|
Rhodomicrobium, Hyphomicrobiaceae, Rhizobiales, Alpha-proteobacteria, Bacteria |
Rhodomicrobium vannielii |
PHO
|
TEL
|
A
|
1
|
|
Rhodonellum, Cytophagaceae, Cytophagales, Cytophagia, Bacteroidetes, Bacteria |
Rhodonellum psychrophilum |
HET
|
PSY,ALC
|
A
|
1
|
|
Rhodopila, Acetobacteraceae, Rhodospirillales, Alpha-proteobacteria, Bacteria |
Rhodopila globiformis |
PHO
|
DUL
|
AN
|
1
|
|
Rhodopirellula, Planctomycetaceae, Planctomycetales, Planctomycetes, Bacteria |
Rhodopirellula baltica |
HET
|
MAR
|
A
|
1
|
|
Rhodoplanes, Hyphomicrobiaceae, Rhizobiales, Alpha-proteobacteria, Bacteria |
Rhodoplanes roseus |
PHO, HET
|
DUL
|
A
|
2
|
|
Rhodopseudomonas, Bradyrhizobiaceae, Rhizobiales, Alpha-proteobacteria, Bacteria |
Rhodopseudomonas palustris |
PHO
|
DUL
|
A
|
4
|
|
Rhodospira, Rhodospirillaceae, Rhodospirillales, Alpha-proteobacteria, Bacteria |
Rhodospira trueperi |
PHO
|
DUL,TEL
|
AN
|
1
|
|
Rhodospirillum, Rhodospirillaceae, Rhodospirillales, Alpha-proteobacteria, Bacteria |
Rhodospirillum rubrum |
PHO
|
DUL,TEL
|
AN
|
2
|
|
Rhodothalassium, Rhodospirillaceae, Rhodospirillales, Alpha-proteobacteria, Bacteria |
Rhodothalassium salexigens |
PHO
|
MAR
|
AN
|
1
|
|
Rhodothermus, Rhodothermaceae, Cytophagales, Cytophagia, Bacteroidetes, Bacteria |
Rhodothermus marinus |
HET
|
MAR,THE
|
A
|
2
|
|
Rhodovarius, Acetobacteraceae, Rhodospirillales, Alpha-proteobacteria, Bacteria |
Rhodovarius lipocyclicus |
HET |
? |
A |
1
|
|
Rhodovastum, Acetobacteraceae, Rhodospirillales, Alpha-proteobacteria, Bacteria |
Rhodovastum atsumiense |
HET,PHO |
TEL |
A,AN |
1 |
|
Rhodovibrio, Rhodospirillaceae, Rhodospirillales, Alpha-proteobacteria, Bacteria |
Rhodovibrio salinarum |
PHO
|
MAR
|
AN
|
2
|
|
Rhodovulum, Rhodobacteraceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Rhodovulum sulfidophilum |
PHO
|
MAR
|
F
|
8
|
|
Rickettsia, Rickettsiaceae, Rickettsiales, Alpha-proteobacteria, Bacteria |
Rickettsia prowazekii |
HET
|
PAR,PAT
|
A
|
24
|
|
Rickettsiella, Legionellales, Gamma-proteobacteria, Bacteria |
Rickettsiella popilliae |
HET
|
PAR, PAT
|
A
|
4
|
|
Riemerella, Flavobacteriaceae, Flavobacteriales, Flavobacteria, Bacteroidetes, Bacteria |
Riemerella anatipestifer |
HET
|
CLI
|
A
|
2
|
|
Rikenella, Rikenellaceae, Bacteroidales, Bacteroides, Bacteroidetes, Bacteria |
Rikenella microfusus |
HET
|
?
|
F
|
1
|
|
Rivibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria |
Rivibacter (ex Methylibium) subsaxonicus |
HET |
? |
A |
1 |
|
Rivularia, Cyanobacteria, Sous-section IV, Cyanobacteria, Bacteria |
nd |
PHO, FIX
|
MAR
|
A
|
nd
|
|
Robiginitalea, Flavobacteriaceae, Flavobacteriales, Flavobacteria, Bacteroidetes, Bacteria |
Robiginitalea biformata |
HET
|
MAR
|
A
|
1
|
|
Robiginitomaculum, Hyphomonadaceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Robiginitomaculum antarcticum |
HET
|
MAR
|
A
|
1
|
|
Robinsoniella, Lachnospiraceae, Clostridiales, Clostridia, Firmicutes, Bacteria |
Robinsoniella peoriensis |
HET |
TUB |
AN |
1 |
|
Rochalimaea = Bartonella |
Roseateles, Comamonadaceae, Burkholderiales, Beta-proteobacteria, Bacteria |
Roseateles depolymerans |
HET
|
DUL
|
A
|
2
|
|
Roseburia, Lachnospiraceae, Clostridiales, Clostridia, Firmicutes, Bacteria |
Roseburia cecicola |
HET
|
TUB
|
AN
|
5
|
|
Roseibaca, Rhodobacteraceae, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria |
Roseibaca ekhonensis |
HET |
DUL |
A |
1 |
|
Roseibacillus, Verrucomicrobiaceae, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria |
Roseibacillus ishigakijimensis |
HET
|
MAR
|
A
|
3
|
|
Roseibacterium, Rhodobacteraceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Roseibacterium elongatum |
HET
|
MAR
|
A
|
1
|
|
Roseibium, Rhodobacteraceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Roseibium denhamense |
HET
|
DUL
|
A
|
2
|
|
Roseicitreum, Rhodobacteraceae, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria |
Roseicitreum antarcticum |
HET |
MAR |
A |
1 |
|
Roseicyclus, Rhodobacteraceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Roseicyclus mahoneyensis |
HET
|
DUL,HAL
|
A
|
1
|
|
Roseiflexus, Chloroflexaceae, Chloroflexales, Chloroflexi, Bacteria |
Roseiflexus castenholzii |
HET,PHO
|
DUL,THE
|
A
|
1
|
|
Roseinatronobacter, Rhodobacteraceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Roseinatronobacter thiooxidans |
HET
|
DUL,ALC,HAL
|
A
|
1
|
|
Roseisalinus, Rhodobacteraceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Roseisalinus antarcticus |
HET
|
DUL,HAL
|
A,M
|
1
|
|
Roseivirga, Flammeovirgaceae, Cytophagales, Cytophagia, Bacteroidetes, Bacteria |
Roseivirga ehrenbergii |
HET
|
MAR
|
A
|
4
|
|
Roseivivax, Rhodobacteraceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Roseivivax halodurans |
HET
|
DUL,HAL
|
A
|
2
|
|
Roseobacter, Rhodobacteraceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Roseobacter litoralis |
HET, DEN
|
MAR
|
A
|
4
|
|
Roseococcus, Acetobacteraceae, Rhodospirillales, Alpha-proteobacteria, Bacteria |
Roseococcus thiosulfatophilus |
HET,PHO
|
DUL
|
A
|
1
|
|
Roseomonas, Acetobacteraceae, Rhodospirillales, Alpha-proteobacteria, Bacteria |
Roseomonas gilardii |
HET
|
PAT
|
A
|
5
|
|
Roseospira, Rhodospirillaceae, Rhodospirillales, Alpha-proteobacteria, Bacteria |
Roseospira mediosalina |
PHO
|
MAR
|
A
|
3
|
|
Roseospirillum, Rhodobiaceae, Rhizobiales, Alpha-proteobacteria, Bacteria |
Roseospirillum parvum |
FIX, PHO
|
TEL
|
A
|
1
|
|
Roseovarius, Rhodobacteraceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Roseovarius tolerans |
HET
|
DUL,HAL
|
A
|
4
|
|
Rothia, Micrococcaceae, Micrococcineae, Actinomycetales, Actinobacteria, Bacteria |
Rothia dentocariosa |
HET
|
PAT
|
F
|
5
|
|
Ruania, Micrococcineae, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria |
Ruania albidiflava |
HET
|
TEL
|
A
|
1
|
|
Rubellimicrobium, Rhodobacteraceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Rubellimicrobium thermophilum |
HET
|
TEL,THE
|
A |
1
|
|
Rubidibacter, Cyanobacteria, Bacteria |
Rubidibacter lacunae |
PHO, AUT |
MAR |
A |
1 |
|
Rubidimonas, Saprospiraceae, Sphingobacteriales, Sphingobacteria, Bacteroidetes, Bacteria |
Rubidimonas crustatorum |
HET |
TUB,MAR |
A |
1 |
|
Rubribacterium, Rhodobacteraceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Rubribacterium polymorphum |
PHO,HET |
DUL,ALC |
F |
1 |
|
Rubricoccus, Rhodothermaceae, Cytophagales, Cytophagia, Bacteroidetes, Bacteria |
Rubricoccus marinus |
HET |
MAR,DEN |
A |
1 |
|
Rubrimonas, Rhodobacteraceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Rubrimonas cliftonensis |
HET
|
DUL,HAL
|
A
|
1
|
|
Rubritalea, Verrucomicrobiaceae, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria |
Rubritalea marina |
HET
|
MAR
|
A
|
1
|
|
Rubritepida, Acetobacteraceae, Rhodospirillales, Alpha-proteobacteria, Bacteria |
Rubritepida flocculans |
HET
|
THE
|
A |
1
|
|
Rubrivivax, Comamonadaceae, Burkholderiales, Beta-proteobacteria, Bacteria |
Rubrivivax gelatinosus |
HET, PHO
|
DUL
|
A
|
2
|
|
Rubrobacter, Rubrobacteraceae, Rubrobacterineae, Rubrobacterales, Actinobacteria, Bacteria |
Rubrobacter radiotolerans |
HET
|
DUL,THE
|
A
|
3
|
|
Rudaea, Xanthomonadaceae, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria |
Rudaea cellulosilytica |
HET |
TEL |
A |
1 |
|
Rudanella, Cytophagaceae, Cytophagales, Cytophagia, Bacteroidetes, Bacteria |
Rudanella lutea |
HET |
AIR |
A |
1 |
|
Ruegeria, Rhodobacteraceae, Rhodobacterales, Alpha-proteobacteria, Bacteria |
Ruegeria atlantica |
HET
|
MAR
|
A
|
5
|
|
Rugamonas, Pseudomonadaceae, Pseudomonadales, Gamma-proteobacteria, Bacteria |
Rugamonas rubra |
HET, DEN
|
DUL
|
A
|
1
|
|
Rugosimonospora, Micromonosporaceae, Micromonosporineae, Actinomycetales, Actinobacteridae, Actinobacteria, Actinobacteria, Bacteria |
Rugosimonospora acidiphila |
HET |
TEL |
A |
2 |
|
Ruminobacter, Succinivibrionaceae, Aeromonadales, Gamma-proteobacteria, Bacteria |
Ruminobacter amylophilus |
HET
|
TUB
|
A
|
1
|
|
Ruminococcus, Ruminococcaceae, Clostridiales, Clostridia, Firmicutes, Bacteria |
Ruminococcus flavefaciens |
HET
|
TUB
|
AN
|
13
|
|
Rummeliibacillus, Bacillales, Bacilli, Firmicutes, Bacteria |
Rummeliibacillus stabekisii |
HET |
TEL |
A |
1 |
|
Runella, Cytophagaceae, Cytophagales, Cytophagia, Bacteroidetes, Bacteria |
Runella slithyformis |
HET
|
DUL
|
A
|
3
|
|

|